Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953190.1_cds_XP_016492429.1_82642
CDS Infomation

[gene=LOC107811951] [db_xref=GeneID:107811951] [protein=TOM1-like protein 2] [protein_id=XP_016492429.1] [location=join(11759..12280,12562..12807,17618..18037)] [gbkey=CDS]
Sequence

ATGAGTGACAACAATTTGTTGGATAAAGTCAGCGCCTTTGGGGAGCGCCTGAAGATTGGG
GGATCGGAGGTTGGGCAAAAGATCACTGCTGGAATGAGCTCGATGAGTTTCAAGATGAAG
GAACTTTTCCAAGGCCCAAATCAGGCTGATAAGCTTGTCGAGGAAGCCACAGCTGAAACT
CTGGATGAACCTGATTGGGCTATGAATCTTGAGCTTTGTGACATGATTAATCACGATAGA
ATCAATAGTGTTGAACTGATTAGGGGCGTGAAGAAAAGGATAATGCTGAAGAGCCCCAGG
ATTCAGTACTTAGGGTTGGTGTTACTTGAAACTATTGCAAAGAATTGCGAGAAGGCGTTC
TCCGAAATTGCTGCTGAGAGGGTTCTGGATGAGATGGTGAAGTTGATTGATGACCCTCAA
ACTGTTGTTAACAATCGGAACAAGGCCCTGGTGTTAATTGAAGCTTGGGGAGAATCATCG
AGCGAGCTTCGCTATTTACCTGTGTATGAAGAGACTTACAAGAGTTTGAGATCCAGAGGG
GTACGTTTTCCTGGTCGTGACCATGAAAGCCTAGCTCCGATCTTCACTCCTCCAAGAACA
GTGTCAGCTGCAGAACCAGATGTTACTCTGGCACAGCAAATCCAACATGAAATTCCACGG
GAGAACTTTTCAGCTGAACAGACAAAGGAGGCATTTGATGTGGCTAGAAATAGTGTAGAG
CTTCTGACAACTGTTTTGTCCTCTTCACCTCAGCAGGATGCTCTGCAGGATGACTTGTCA
GCTACGCTAGTACAACAGTGTCGCCAGTCCCTCAATACTGTTCAGAGAATCATCGAGACT
GCTGGAGATAATGAGGCCCTCCTTTTTGAAGCCCTGAATATAAATGATGAAGTTCAAAAG
GCCCTTTCGAAGTATGACGAATTGAAGAAACCTATGGTTGTTTCATCAGAGCCAGAACCT
GCCATGATTCCAGTTGCTGTGGAGCCCGATGAGTCCCCCCGTGCTGGAAAAGAAGATGCT
CTGATCAGAAAACCATCAGGCTCCCGGTCTGCAGTCCACGGAGGAAATGATGATATGATG
GATGATCTTGATGAGATGATTTTTGGTAAAAAAGTGGATGGCACATCTGAATCAAGACAT
GACACAAAGAAGCAGCAATCGCCAAAAGATGATCTCATCTCATTTTGA

Peptide Sequence

PEP ID

XP_016492429.1
PEP Infomation

PREDICTED: TOM1-like protein 2 [Nicotiana tabacum]
Sequence

MSDNNLLDKVSAFGERLKIGGSEVGQKITAGMSSMSFKMKELFQGPNQADKLVEEATAET
LDEPDWAMNLELCDMINHDRINSVELIRGVKKRIMLKSPRIQYLGLVLLETIAKNCEKAF
SEIAAERVLDEMVKLIDDPQTVVNNRNKALVLIEAWGESSSELRYLPVYEETYKSLRSRG
VRFPGRDHESLAPIFTPPRTVSAAEPDVTLAQQIQHEIPRENFSAEQTKEAFDVARNSVE
LLTTVLSSSPQQDALQDDLSATLVQQCRQSLNTVQRIIETAGDNEALLFEALNINDEVQK
ALSKYDELKKPMVVSSEPEPAMIPVAVEPDESPRAGKEDALIRKPSGSRSAVHGGNDDMM
DDLDEMIFGKKVDGTSESRHDTKKQQSPKDDLISF

Transcript Sequence

Gene sequence data has not been registered.